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Cellular Biology |
From the Division of Cardiology, Emory University, Atlanta, Ga.
Correspondence to Charles D. Searles, Division of Cardiology, Emory University, 1639 Pierce Dr, WMB 319, Atlanta, GA 30322. E-mail csearle{at}emory.edu
| Abstract |
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Key Words: endothelial nitric oxide synthase mRNA binding protein mRNA stability 3' untranslated region cytoskeletal dynamics
| Introduction |
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,11 hypoxia,12 lipopolysaccaride,13 thrombin,14 and high concentrations of oxidized low-density lipoprotein15 all decreased eNOS levels. For many of these stimuli, modulation of eNOS mRNA stability plays an essential role in determining eNOS expression. However, the details of the mechanism(s) responsible for these alterations in eNOS transcript half-life have not been fully elucidated. One of the most potent stimuli for eNOS expression in vascular endothelial cells is growth. In proliferating bovine aortic endothelial cells (BAECs), eNOS mRNA was increased 4- to 5-fold as compared with cells several days after confluence.16 This enhanced expression was entirely attributable to an increase in eNOS mRNA stability; eNOS mRNA half-life was 2 to 3 times greater in proliferating BAECs versus confluent cells.17 Previously, we identified a cis-acting sequence element within the proximal portion of the eNOS 3' untranslated region (3'UTR) that was associated with regulation of eNOS mRNA stability. A 51-kDa cytoplasmic protein was observed to bind to this sequence, and ribonucleoprotein binding was inversely related to eNOS mRNA stability. Furthermore, deletion of the cis-acting sequence element led to stabilization of chimeric eNOS mRNA, suggesting that the 51-kDa ribonucleoprotein may be a destabilizing factor.
The purpose of the present study was to determine the identity of the 51-kDa ribonucleoprotein and further characterize its role in eNOS expression. The RNAprotein complex was purified and subjected to mass spectrometric analysis. The results indicated that monomeric actin was the predominant protein in the eNOS 51-kDa ribonucleoprotein complex. Subsequently, the relationship between the actin cytoskeleton and eNOS mRNA was examined microscopically and biochemically. Further studies were performed to examine the role of the G-actin versus filamentous actin (F-actin) concentration in regulating eNOS expression. Our findings provide evidence for a novel mechanism that uses the dynamic properties of the actin cytoskeleton to regulate eNOS expression.
| Materials and Methods |
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Cell Culture
BAECs were cultured in medium (M199) containing 10% fetal calf serum as described.8 Experiments were conducted on cells between passages 3 and 9.
UV-Crosslinking Assays
Cytosolic protein fractions were prepared according to the protocol by Dignam et al.18 UV-crosslinking assays were performed essentially as described previously17 with the exception that biotinylated riboprobes were used. Biotinylated riboprobes of the eNOS 3'UTR (545 nt) were prepared by in vitro transcription reactions using T7 RNA polymerase (Ambion) and biotin-16-uridine-5'-triphosphate. After the UV-crosslinking reaction, the biotinylated RNAprotein complexes were separated on a 12% SDS-polyacrylamide gel, electroblotted to positively charged nylon membranes, and detected using the Bright Star Biodetect Kit (Ambion).
Purification and Identification of eNOS mRNA-Binding Protein
Cytosolic protein was extracted from confluent endothelial cells as described for the UV-crosslinking assay. Protein extracts were concentrated using a centrifugation filter device (10 000 molecular weight cutoff; Millipore), and 5 mg of concentrated cytosolic protein was incubated with 20 µg of biotinylated eNOS 3'UTR riboprobes under UV-crosslinking assay conditions. The biotinylated RNAprotein complex was loaded on 0.3 mL of streptavidin-agarose beads that had been previously washed extensively with buffer containing HEPES (10 mmol/L, pH 7.4). The beads were washed with 50 mL of HEPES buffer containing 0.4 mol/L urea. The beads were subsequently boiled in 0.3 mL of Laemmli buffer for 5 minutes and briefly centrifuged. The supernatant was loaded onto multiple lanes of a 12% SDS-polyacrylamide gel and separated by electrophoresis. The gel was divided into 2 parts; one part was stained with Coomassie blue and the other part was processed for detection of biotinylated protein. The target band was excised from the gel, and the protein was digested with trypsin before being subjected to nanospray MS/MS analysis on a Q-Tof mass spectrometer (Emory University Microchemical Facility and Yale Cancer Center Mass Spectrometry Resource Laboratory). Before analysis, an internal peptide calibrant (Glu-fibrinogen) was added to the digest, and the sample was cleaned with a C-18 packed ZipTip. MS/MS spectra were searched using the Sequest search program, which was performed against the NCBI nr protein database.
Fluorescence Confocal Microscopy
Details of G-actin and F-actin staining are described in the online data supplement available at http://circres.ahajournals.org. Alexa Fluor 488 DNase I was used for staining G-actin in BAECs, and Alexa Fluor 568 phalloidin was used for staining F-actin. Cells were examined using a Zeiss LSM 510 laser scanning confocal microscope.
Fluorescence In Situ Hybridization
ENOS templates were transcribed with T7 RNA polymerase and Sp6 RNA polymerase (Ambion) in the presence of digoxigenin-11-uridine-5'-triphosphate to generate a 693-bp sense riboprobe and a 705-bp antisense probe, respectively. Details of the hybridization process are described in online data supplement.
Cell Fractionation and RNA Quantification
Polysomal fractions were isolated using a sequential detergent/salt extraction procedure described previously.1921 Total RNA was isolated from each polysome fractions using Tri Reagent and assessed by the A260/A280 absorbance ratio. ENOS mRNA was quantified by real-time polymerase chain reaction (PCR) of cDNA derived from reverse transcribed total RNA; 5 µg of total RNA from each fraction was reverse-transcribed using either an oligo dT-primer (5'-GCGAGCTCCGCGGCCGCGT(12)-3') or random hexamer primer and Superscript III reverse-transcriptase (Invitrogen). Real-time PCR was performed on 2 µL of the reverse transcription reaction, using the Light Cycler (Roche) as described earlier.22 The bovine eNOS primers, 5'-CCCAACAGCCCCACGCTGACC-3' and 5'-CACTGT-GATGGCCGAGCG AAGGTTG-3' were located on different exons. 18S rRNA was also quantified in each sample.
G-actin/F-actin In Vivo Assay
Filamentous actin (F-actin) and free globular-actin (G-actin) content in BAECs were measured using an assay kit obtained from Cytoskeleton Inc. Details of the assay are described in the online data supplement.
Northern Blotting
Northern analysis was performed as previously described.8
| Results |
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Analysis of 5 MS/MS spectra indicated that monomeric actin was the predominant protein present in the target band. Although analysis of the MS/MS spectra was able to rule out the presence of the
actin isoform, the spectra were consistent with peptide fragments common to the ß and
isoforms of actin. These results suggest that monomeric actin (either ß or
) is an integral part of the 51-kDa ribonucleoprotein that interacts with the eNOS 3'UTR. Because of the intrinsic nature of mass spectrometry, there may be other proteins in the sample that were not detected but were part of the ribonucleoprotein complex. Despite this possibility, the discrepancy in size between actin (43 kDa) and the 51-kDa protein may be attributable in part to the presence of a crosslinked fragment of eNOS 3'UTR (
43 nt).
To verify that monomeric actin is able to interact with eNOS mRNA, RNAprotein UV-crosslinking analysis was performed with biotinylated eNOS 3'UTR and purified, monomeric nonmuscle actin (80% ß-actin, 20%
-actin; 99% pure; Cytoskeleton Inc.). On SDS-PAGE (Figure 1B), there was a band with a molecular mass similar to the 51-kDa ribonucleoprotein seen in cytoplasmic extracts. There was also a biotinylated band with a higher molecular mass (above the arrowhead-marked band in Figure 1B). This band was observed despite the omission of protein from the assay, suggesting that it was incompletely digested riboprobe. Of note, up to 2 µg of monomeric actin was required to detect a signal under these assay conditions. This may reflect the physiological concentration of monomeric actin needed for interaction with the eNOS 3'UTR, or it may indicate the absence of a factor that facilitates the actineNOS interaction in cytoplasmic extracts at lower actin concentrations.
Effect of Actin Monomer Binding Proteins on Protein Binding to the eNOS 3'UTR
We further examined the interaction of actin with the eNOS 3'UTR by determining the effects of 2 actin monomer sequestering proteins on formation of the eNOS 51-kDa ribonucleoprotein. Cytoplasmic extracts were preincubated (30 minutes) with increasing concentrations of DNase I, a protein known to bind specifically G-actin,23 and UV-crosslinking analysis was performed; 1.0, 2.5, and 4.0 µmol/L DNase I inhibited eNOS ribonucleoprotein formation by 70%, 83%, and 97%, respectively (Figure 2). Similar findings were observed after preincubation (30 minutes) with thymosin ß-4, the main actin monomer-sequestering protein in eukaryotic cells24 (Figure 3); 10 and 50 µmol/L of thymosin ß-4 inhibited protein binding by 37% and 70%, respectively. These results indicate that the eNOS mRNAprotein interaction can be competitively inhibited by proteins known to specifically bind and sequester G-actin. This supports the finding that monomeric actin is an integral part of the 51-kDa ribonucleoprotein. Furthermore, these results provide some evidence as to which subdomain of monomeric actin interacts with eNOS mRNA; the actin/eNOS interaction must involve the DNase I and thymosin ß-4 binding sites. The binding sites for DNase I and thymosin ß-4 are located on oppositely spaced subdomains of actin that bridge an interdomainal cleft, but these subdomains are allosterically coupled.23,25 Interestingly, another actin monomer-binding protein, profilin, did not inhibit formation of the eNOS ribonucleoprotein complex (data not shown).
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G- and F-actin Localization and Quantification in Proliferating Versus Confluent Cells
Because a major property of actin is its ability to exist in 2 forms, G-actin and F-actin, we hypothesized that the interaction between monomeric actin and eNOS mRNA is related to the relative concentration of cytoplasmic G-actin versus F-actin. G-actin and F-actin pools in proliferating and confluent cells were fluorescently stained and examined by laser scanning confocal microscopy (Figure 4). In confluent cells, there was intense, diffuse staining for F-actin, most notably in the cell periphery, at sites of cellcell contact. There was also staining for actin fibers centrally, which are likely involved in cellsubstratum adhesion. Staining for G-actin showed an area of intense perinuclear localization. In contrast to confluent cells, the diffuse network of F-actin was not present in proliferating cells; F-actin appeared to be concentrated near the cell periphery. G-actin staining in these cells was much less intense than in confluent cells, and perinuclear localization was absent.
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The effect of cell growth on actin cytoskeleton organization was quantified by measuring the ratio of G-actin to F-actin. In confluent cells, the G/F-actin ratio of 1 is consistent with a high concentration of monomeric actin that is present in nonmuscle cells at basal state.26 The confluent cell G/F-actin ratio was 2-fold greater than that of proliferating cells (Figure 5), indicating a relatively higher concentration of monomeric actin and a lower concentration of F-actin in confluent cells. The observation of increased G-actin in confluent cells, together with the finding that monomeric actin is a major component of a ribonucleoprotein associated with eNOS mRNA destabilization, suggests that actin cytoskeletal organization is important to the growth-related posttranscriptional regulation of eNOS expression.
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Localization of eNOS mRNA and G-actin in Confluent Versus Proliferating BAECs
The localization of eNOS transcripts relative to G-actin was examined by confocal microscopy (Figure 6). Simultaneous fluorescence in situ hybridization of eNOS mRNA and G-actin fluorescent staining were performed on cells in the 2 growth states. In confluent cells, eNOS mRNA was concentrated in the perinuclear region and this localization correlated with the distribution of the most intense G-actin staining. In proliferating cells, eNOS mRNA was found to be more diffuse and not to be colocalized with G-actin. These images demonstrate growth-related differences in the relationship between G-actin and eNOS mRNA in whole cells.
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To further characterize growth-related differences in eNOS mRNA localization, an analysis of eNOS mRNA levels in different subcellular polysomal fractions was performed. The free polysome fraction (FP) contains soluble cellular components including G-actin, whereas the cytoskeletal-bound polysome (CBP) fraction contains cellular components associated with cytoskeletal filaments (F-actin) and other cell matrix material. Polysomes associated with cell membranes and the endoplasmic reticulum are found in the membrane-bound polysome (MBP) fraction.
The eNOS transcripts from proliferating cells were relatively more enriched in the CBP fraction, with a CBP/FBP ratio of 2.7 compared with a ratio of 0.37 for confluent cells (Figure 7). Conversely, eNOS transcripts were enriched in FP fraction of confluent cells. There was no statistical difference in the amount of eNOS mRNA that localized to the MBP fractions, indicating a relatively stable amount of eNOS mRNA in this fraction during cell growth. These results support the concept that localization of eNOS mRNA changes with cell growth; eNOS transcripts in proliferating cells localize to cytoskeletal filaments, and, as cells stop proliferating, the eNOS mRNA shifts to noncell matrix polysomes. Furthermore, because G-actin is largely found in the free polysomal fraction, the enrichment of confluent cell eNOS mRNA in this fraction is consistent with the colocalization of G-actin and eNOS mRNA that was observed in our confocal microscopy studies.
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Effect of Actin-Targeted Agents on Protein Binding to the eNOS 3'UTR and eNOS Expression
Two different actin-binding agents were used to assess the effects of specific actin perturbation on eNOS mRNA levels and eNOS ribonucleoprotein formation. Jasplakinolide (JASPA) is a natural marine sponge product that is a potent inducer of actin polymerization and a stabilizer of actin filaments in vitro.27 Swinholide A (SWA) is a dimeric macrolide that is known to have 2 effects on actin in vitro: it severs actin filaments and it dimerizes actin monomers.27,28 The G/F-actin ratios were quantified in BAECs after treatment with JASPA or SWA (Figure 8). JASPA, as expected, lowered the G/F-actin ratio, but SWA appeared to increase the G/F-actin ratio. Although initial analysis of the S100 fraction indicated that SWA-treated cells contained an abundance of G-actin, further sedimentation at 150 000g for 3 hours revealed that a majority was actually dimeric actin (data not shown). Despite different actions, these 2 drugs had similar effects on the eNOS ribonucleoprotein formation and eNOS mRNA expression in BAECs. UV-crosslinking analysis of cells treated with 0.5 µmol/L JASPA resulted in a 37% decrease in binding of the 51-kDa ribonucleoprotein. A 37% decrease in binding activity was also observed after treatment with 100 nmol/L of SWA (Figure 8). JASPA treatment led to a dose-dependent increase in eNOS mRNA levels, which were increased 2-fold with 0.5 µmol/L JASPA (Figure 8). eNOS mRNA levels were also increased 2-fold after treatment with 100 nmol/L of SWA.
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These studies show that pharmacological lowering of the proportion of G-actin in confluent cells leads to decreased binding of the 51-kDa ribonucleoprotein to eNOS mRNA and an increase in eNOS expression. This was achieved by drugs with different mechanisms of action. Furthermore, JASPA increased eNOS mRNA stability (online Figure I). These results are consistent with a posttranscriptional regulatory mechanism whereby the cytosolic interaction of eNOS mRNA with monomeric actin leads to its destabilization and decreased expression.
| Discussion |
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The actin cytoskeleton has been shown to be intimately involved in the maintenance of endothelial integrity by providing the structural framework for cell shape, cell movement, and cellcell and cellsubstratum interactions.29 Within the cells of a confluent monolayer, actin microfilaments are distributed peripherally, known as the dense peripheral band, and centrally, known as central microfilaments (or stress fibers).30 These bundles of microfilaments undergo dynamic changes in response to physiological and pathological stresses, including shear stress, vascular pressure, and wound healing processes.29,31,32 Less is known about the importance of G-actin in cytoskeletal function. Our data show dynamic changes in cytoskeleton organization during cell growth and indicate a role for G-actin concentration in regulating endothelial gene expression.
There is increasing evidence that mechanisms involved in cytoplasmic mRNA metabolism are under the dynamic control of various cytoskeletal elements. It has been shown that for some proteins, the subcellular localization and targeting of their mRNAs plays a significant role in determining efficient translation and proper protein localization.33 This has led to the concept that transport and localization of mRNA involves cytoskeletal components.33 Because mRNA stability is often closely linked to translation, cytoskeleton-mediated transport and localization of mRNA to appropriate polysomal fractions may regulate its turnover. Our results indicate that localization of eNOS mRNA varies with cell growth and that this is likely related to changes in the actin cytoskeleton.
A relationship between mRNA stability and the state of actin cytoskeletal polymerization has been described for certain highly unstable lymphokine mRNAs.34,35 Cytochalasin-induced disruption of lymphocyte microfilaments resulted in more stable IL-2 and tumor necrosis factor-
mRNAs, and this was associated with an altered subcellular localization of destabilizing RNA-binding proteins. These proteins could be immunoprecipitated with anti-actin antibodies. In addition, the stability and expression of actin mRNA itself are inversely related to the cytoplasmic level of G-actin, but not F-actin.36 This negative autoregulatory mechanism involves the actin mRNA 3'UTR; actin mRNA lacking the 3'UTR is not subject to autoregulatory inhibition.
An association between actin cytoskeleton organization and eNOS expression has been described previously. HMG-CoA reductase inhibitors posttranslationally inhibit Rho activity and upregulate eNOS expression posttranscriptionally.9 Endothelial cells that overexpressed a dominant-negative Rho A mutant exhibited decreased actin stress fiber formation and increased eNOS expression.37 Mice treated with a Rho inhibitor or the actin cytoskeleton disrupter cytochalasin D showed increased vascular eNOS expression and activity, and these changes were associated with a decrease in cerebral infarction size after middle cerebral artery occlusion.37
The endothelial actin cytoskeleton is regulated by many stimuli that have also been shown to influence eNOS expression, but whether the mechanism for growth-related regulation is applicable to other conditions is uncertain. We have performed UV-crosslinking analysis on cytoplasmic extracts from cells exposed to shear stress, hydrogen peroxide, and mevastatin to determine whether these stimuli have an effect on actin binding to the eNOS 3'UTR. All of these stimuli have been shown to modulate endothelial actin cytoskeleton organization31,32,37,38 and upregulate eNOS expression.5,10,39 Shear stress did not significantly affect actin binding to the eNOS 3'UTR, but treatment with H2O2 resulted in a dramatic decrease in binding activity (online Figure II). Mevastatin also decreased binding activity, but this was not significant statistically. Based on these results, a common link between cell growth and other stimuli in their mechanism(s) for regulating eNOS expression may be endothelial cell response to oxidative stress.
In this study, we show that purified, monomeric actin bound to the eNOS 3'UTR but did so when microgram quantities of protein were used in the UV-crosslinking reaction. Although at first glance the quantity of actin used in this experiment seems excessive for it to reflect a physiological role in vivo, it must be noted that actin is the most abundant protein in most eukaryotic cells, comprising 1% to 5% of total cellular protein in nonmuscle cells, and its intracellular concentration approximates that used in the present in vitro experiments. Alternatively, binding of actin to eNOS transcripts at lower concentrations of actin may be facilitated by other factors. The intracellular concentration of monomeric actin in cells at basal state far exceeds the critical concentration for actin polymerization determined under physiological salt conditions in vitro.26 This high intracellular concentration of G-actin is able to be achieved because of cytoplasmic proteins that can bind and sequester the monomers, effectively raising the critical concentration for polymerization. We were unable to identify any other proteins in our purified ribonucleoprotein sample, but we cannot exclude that the interaction between actin and eNOS mRNA may be facilitated by an actin-binding protein. A recent study identified a direct interaction between actin and eNOS protein in pulmonary artery endothelial cells.40 This study used concentrations of G-actin that approximate the concentrations used in our UV-crosslinking assays, suggesting that this amount of monomeric actin may be physiologically relevant for eNOS regulation in vivo.
In this study, we provide some insight into how the endothelial cell may use the major property of actin (its ability to exist as a monomer or polymer) to regulate eNOS mRNA stability. The molecular details of how the actin/eNOS mRNA interaction regulates eNOS mRNA stability and expression remains to be determined, but it may involve cytoskeletal-mediated mRNA transport, localization, and subsequent translation. Included in this mechanism may be the recruitment of specific degradative enzymes to a G-actin associated ribonucleoprotein complex. Although human eNOS mRNA is also subject to posttranscriptional regulation and demonstrates multiple protein/3'UTR interactions,41 the relevance of the mechanism described in the current studies to human eNOS expression is unknown. Future studies of the actin/eNOS mRNA interaction will need to examine its role in eNOS mRNA localization and metabolism. These studies should provide further mechanistic insight into the regulation of eNOS expression and the relationship between vascular gene expression and cytoskeletal organization.
| Acknowledgments |
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| Footnotes |
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A. J.G. Horrevoets Profilin-1: An Unexpected Molecule Linking Vascular Inflammation to the Actin Cytoskeleton Circ. Res., August 17, 2007; 101(4): 328 - 330. [Full Text] [PDF] |
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D. M. Dudzinski and T. Michel Life history of eNOS: Partners and pathways Cardiovasc Res, July 15, 2007; 75(2): 247 - 260. [Abstract] [Full Text] [PDF] |
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C. D. Searles Transcriptional and posttranscriptional regulation of endothelial nitric oxide synthase expression Am J Physiol Cell Physiol, November 1, 2006; 291(5): C803 - C816. [Abstract] [Full Text] [PDF] |
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J. V. van Thienen, J. O. Fledderus, R. J. Dekker, J. Rohlena, G. A. van IJzendoorn, N. A. Kootstra, H. Pannekoek, and A. J.G. Horrevoets Shear stress sustains atheroprotective endothelial KLF2 expression more potently than statins through mRNA stabilization Cardiovasc Res, November 1, 2006; 72(2): 231 - 240. [Abstract] [Full Text] [PDF] |
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A. Nguyen and H. Cai Netrin-1 induces angiogenesis via a DCC-dependent ERK1/2-eNOS feed-forward mechanism PNAS, April 25, 2006; 103(17): 6530 - 6535. [Abstract] [Full Text] [PDF] |
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A. V. Andreeva, R. Vaiskunaite, M. A. Kutuzov, J. Profirovic, R. A. Skidgel, and T. Voyno-Yasenetskaya Novel Mechanisms of G Protein-Dependent Regulation of Endothelial Nitric-Oxide Synthase Mol. Pharmacol., March 1, 2006; 69(3): 975 - 982. [Abstract] [Full Text] [PDF] |
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D. Kondrikov, H.-R. Han, E. R. Block, and Y. Su Growth and density-dependent regulation of NO synthase by the actin cytoskeleton in pulmonary artery endothelial cells Am J Physiol Lung Cell Mol Physiol, January 1, 2006; 290(1): L41 - L50. [Abstract] [Full Text] [PDF] |
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M. Weber, C. H. Hagedorn, D. G. Harrison, and C. D. Searles Laminar Shear Stress and 3' Polyadenylation of eNOS mRNA Circ. Res., June 10, 2005; 96(11): 1161 - 1168. [Abstract] [Full Text] [PDF] |
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R. P. Brandes Statin-Mediated Inhibition of Rho: Only to Get More NO? Circ. Res., May 13, 2005; 96(9): 927 - 929. [Full Text] [PDF] |
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