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Articles |
From CRBM, CNRS UPR 9008, and INSERM U249 (A. de M., S.D., M.-K.J., J.D., P.B.), Montpellier, France; Faculté de Médecine (E.S.) and Département de Biochimie (J.L.), Université Saint Joseph, Beyrouth, Lebanon; and Service de Génotypage, Généthon (J.W.), Evry, France.
Correspondence to Dr Patrice Bouvagnet, CRBM, CNRS, BP: 5051, 34033 Montpellier Cedex, France. E-mail coeur@crbm2.crbm.cnrs-mop.fr.
| Abstract |
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-30 or
+100). Linkage to the disease locus was detected with the
polymorphic marker D19S604 on the q arm of chromosome 19 (19q13.3)
with a multipoint lod score of 7.18. Additionally, we were able to
exclude the flanking loci D19S606 and D19S571, which are 13 cM apart
because of recombination events in three affected individuals. The
histidine-rich calcium-binding protein gene is found in this
region and is an attractive candidate gene on the basis of its
physiological properties and a tight linkage. There
is no expansion in two exon 1 regions known for a variable number
of triplet repeats.
Key Words: conduction block familial disorders chromosome 19 sudden death
| Introduction |
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Since no obvious candidate genes nor cytogenetic abnormalities pointed at putative chromosomal regions at the time we started the present study, we carried out a genome-wide approach with polymorphic markers in a large Lebanese kindred first described by Stephan7 8 in 1978 as family Z. Markers used for the genome-wide approach on 79 family members are polymorphic (CA)n repeats from Généthon.27 We report here a significant linkage of the mutation to a group of markers on chromosome 19q and suggest that HRC28 is an attractive candidate gene in this family for ICCD.
| Materials and Methods |
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Genotyping
Blood (20 mL) was obtained from 79 individuals of the Lebanese
kindred. Forty-one EBV-transformed B-cell lines were established,
and DNA was extracted by using standard procedures. Most PCR reactions
were performed at the Généthon center as described by
Vignal.32 Généthon, HRC intron
B,33 and CHLC34 markers were processed with
PCR conditions identical to those described elsewhere.32
Genotypes were ascertained without knowledge of their clinical
status.
Linkage Analysis
Two-point lod scores and multipoint analyses were
carried out with the programs MLINK, LODSCORE, and
LINKMAP of the LINKAGE package
(FASTLINK, version 2.20).35 A mutation
frequency of 1:1000 was assumed on the basis of a previous
report by Hiss and Lamb.10 Individuals whose
phenotype status was doubtful (indeterminate; see "Clinical
Evaluation") were not scored for penetrance estimation. The
analysis of the disease status of 114 offspring of affected
parents in our kindred resulted in a penetrance value of 70% for males
and 30% for females. Linkage analyses were carried out by
using these as well as other penetrance values (see "Results").
Allele frequencies were those provided by Gyapay et
al27 , authors' unpublished data (1994), and Hofmann et
al.33 The allele distributions of polymorphic loci
in the Lebanese population are very similar to those of
Caucasians.36 No sex difference in recombination fraction
was assumed. The disease status of indeterminate patients as described
in "Results" was set to 0.
| Results |
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-30 or
+100) (Table 1
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Linkage Analysis
A subset (165) of the 2066 Généthon
markers27 was selected for a linkage study on a subgroup
of 24 (17 affected or carrier, 6 unaffected, and 1 control)
individuals. The 165 markers were selected according to their high
heterozygosity and average intermarket genetic distance of 20 to 30 cM.
Clues that the disease gene might be located on chromosome 19q came
from two adjacent markers (D19S219 and D19S210), which gave positive
lod scores. To confirm linkage of the defect to this region, these
markers and six additional AFM (CA)n repeats that mapped between
D19S219 and D19S210 were analyzed for all participants. Five of
these six additional markers are newly identified microsatellites,
whereas one (D19S418) has been published previously.27
Table 2
presents the locus name and primer sequences
for the newly characterized loci. The assignment of these markers to
19q and the genetic map of this chromosomal region was determined on
CEPH (Centre dEtudes pour le Polymorphisme Humain) families (J.
Weissenbach, unpublished data, 1994) (Fig 3
). The
pairwise lod scores obtained between the mutation and each of these six
markers are shown in Table 3
. A maximum lod score of
6.31 at
=0.00 was achieved with marker D19S604.
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To map this mutation precisely, a multipoint linkage analysis
was carried out on this set of markers. A maximum multipoint lod score
of 7.18 was reached at locus D19S604, with a confidence interval
(1lod-unit decrease in likelihood) of 3 cM toward the centromere
and 7 cM toward the telomere, giving odds of 14 000 000:1
that the mutation is mapped next to this locus (Fig 4
).
Furthermore, analysis of haplotypes in this large family
identified no recombinations between this marker and the disease gene
(Fig 1
). On the basis of these results, we would conclude that the
disease locus is very closely linked to D19S604. Moreover, because of a
recombination event in individuals IV-1, IV-5, and V-6, the flanking
loci D19S606 and D19S571 could be excluded (Figs 1
and 3
). These
markers are 4 cM centromeric and 9 cM telomeric to D19S604,
respectively.
|
Candidate Gene
Distal markers of the CHLC framework map of chromosome 19 as well
as a polymorphic marker located within intron B of the
HRC33 37 were typed in this Lebanese family. HRC is
expressed in cardiac tissue.37 This locus was tightly
linked to marker D19S604 (maximum lod score, 17.8 at
=0.00), the
locus linked to the disease gene. Two-point analysis
between the affection status and HRC intron B demonstrated tight
linkage, with a lod score of 3.02 (
=0.00). Furthermore, the
haplotype analysis did not reveal a single recombination
between these loci. Because HRC has been mapped to the 19q13.3
band,33 the ICCD disease gene is presumably mapped to the
same location. Analysis of two variant
trinucleotide repeats, (GAT)n and (GAG)n in exon
1,33 did not reveal any increased length in affected
individuals. If HRC was the ICCD locus, an expansion of these
trinucleotide repeats as a factor in disease induction
has been eliminated.
| Discussion |
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In the present study, we report a penetrance of ICCD in our kindred that is lower than that in the study of PFHB1 by Brink et al.25 Nevertheless, in the present study, the multipoint analysis gave lod score values above the threshold of 3 within a large range of penetrances. Moreover, there was no variation in the peak location, which was in any case centered on marker D19S604 and HRC intron B.
For those individuals with labile minor anomalies, it is impossible to know a priori whether or not they carry the mutation (phenocopies). This is why they were pooled in an indeterminate group. Misclassifying noncarriers in the affected group would seriously impede the linkage study, whereas misclassifying carriers in the unaffected group would moderately decrease the power of the analysis. It introduces a bias in the penetrance evaluation, but we showed that analysis of this large family with highly polymorphic markers is robust to varying values of penetrance. A retrospective look at these minor anomalies in light of their evolutionary course and the genotypes may allow the identification of specific signs discriminating between phenocopies and early ICCD.
Stephan2 8 and Brink and Torrington6 reported a number of sudden deaths in these families, with a peak in neonates, infants, and late adults. Brink and Torrington6 also suggested an increased risk near adolescence. Although stable for long periods, these conduction blocks may more or less abruptly lead to complete atrioventricular blocks. It is important to evaluate whether carriers of the mutation with normal ECG are prone to develop conduction defects during life.
Genetic mapping of the disease locus showed a very close linkage between the disease gene and the HRC gene. HRC is a protein of 165 kD that is located in the lumen of the sarcoplasmic reticulum. It binds to Ca2+ on nitrocellulose blots, but its role in Ca2+ homeostasis remains to be determined. The tissue-specific expression of this protein is limited to skeletal and heart muscle37 as well as arteriolar smooth muscle cells in the rabbit.28 Although members of this family and other reported families with ICCD do not suffer from overt skeletal or vascular dysfunction, HRC may be considered an attractive candidate gene for cardiac conduction disease because of its expression in cardiac tissue and tight linkage.
While the present report was under review, PFHB1 was mapped to
19q13.39 The authors localized the mutation to an interval
between the myotonic dystrophy locus and the telomere. The only
polymorphic marker tested in this large region was localized within
the KLK1 locus and gave a highly significant lod score (
=0.00). The
genetic interval where ICCD has been mapped (D19S606 to D19S571) lies
in this large region, but it is not clear at this point whether ICCD
and PFHB1 map to the same locus. According to CHLC maps, HRC lies 5.8
cM centromeric to KLK1. This distance might represent as many
as 5.8 million base pairs or more than 100 genes.
| Selected Abbreviations and Acronyms |
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| Acknowledgments |
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Received December 30, 1994; accepted June 12, 1995.
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